Downloads



arrow Download Splicer 1.1, a tool for computer assisted hand curation of sequences in FASTA format.

arrow Download psi-distance 1.0, a simple tool to calculate percent sequence identity distance matrices in column format.

arrow Download tree-distance 1.0, a simple tool to calculate distance matrices in column format from trees in Newick format.

arrow Download C-linkage 1.2, a tool to do complete linkage clustering in O(n^2 log n). See benchmark comparing Mothur to C-linkage.

arrow Download clustering-quality 1.0, a simple tool to calculate Calinski-Harabasz index for quality of clustering of clustered nucleotide sequences in FASTA format.

arrow Download voltron 0.1, A Python merging script to merge NAST and Infernal alignments. (See readme for usage information.)

arrow The latest source code for above utilities is available in a Git repository.

arrow All software available for download on this website is copyrighted by its authors and available under the GNU General Public License version 3.


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